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SBI/miRZip™ Pooled Anti-miRNA Virus Library/MZIPPLVA-1-

Overview

Simplifyinghigh-throughputphenotypicscreeningformiRfunction

TakeyourmiRstudiestothenextlevelwithSBI’spooledmiRZip™anti-miRNALentivirusLibrary.QuicklyandefficientlycreatestablemiRknockdownsinthecelllineofyourchoiceforhigh-throughputphenotypicscreening.SBI’smiRZipconstructsleverageourpowerfulandwell-regardedthird-generationlentivectortechnologytodelivershorthairpinRNAs(shRNA)that,afterprocessing,preferentiallyproduceananti-sensemiRNA.Thehairpinisrationallydesignedtobeasymmetric,ensuringthatthesensestranddoesnotcontaintheendogenousmiRNAsequenceandenablingaccumulationoftheanti-miRNA.TheresultisrobustderepressionofthetranscriptstargetedbythemicroRNAbeing“zipped,”andelevationofthecorrespondingproteinlevels.

StudymiRswithSBI’spowerfulmiRZiptechnology:

  • Stableandpermanentanti-microRNAexpressionfromaconstitutiveH1promoter
  • Rationallydesigned,asymmetrichairpinsoptimizedforanti-sensemicroRNAproduction
  • EfficientsuppressionofspecificendogenousmicroRNAs
  • Reliabledeliverytodividingornon-dividingcells
  • Selection/sortingfortransfected/transducedcellswitheithercopGFPorpuromycin

Conducthigh-throughputphenotypicscreenswithourpoolofpre-packagedlentiviralparticlescontainingourentiremiRZipcollection(Cat.#MZIPPLVA-1).

HowItWorks

ScreeningwiththemiRZipLibraryisstraightforward

  • TransducethemiRZipLibraryintotargetcells
  • Treattoinducephenotype
  • Useafunctionalassay(invasionassay,differentiationassay,proliferationassay,apoptosisassay,etc.)toselectforcellsexhibitingthedesiredphenotype
  • IdentifymiReffectorsbyamplifyingeffectormiRandsequencing

SupportingData

SeeSBI’smirZiptechnologyinaction

miRZipconstructsexpresshighlevelsofanti-microRNAs

Figure1.miRZipconstructsexpresshighlevelsofanti-microRNAs.miRZipconstructsweretransfectedintoHEK293cells,totalRNAisolated,andmiRZiplevelsmeasuredusingSBI’sQuantiMirAssay(Cat.#RA420A-1).ComparedtoQuantiMirassaysperformedonRNAisolatedfromnon-transfectedcells,themiRZip-transfectedcellsdeliveredhighexpressionlevelsofthespecificmiRZipanti-miRNAs.

EfficientmodulationoftargetproteinlevelsbySBI’sLenti-miRandmiRZiptechnologies

Figure2.TargetproteinlevelsareefficientlymodulatedbySBI’sLenti-miR-29aandmiRZip-29amicroRNAconstructs.

miRZiptechnologyiseffectiveinafunctionalassay

Figure3.miRZip-21andmiRZip-145exhibitanti-oncogenicandoncogenicactivity,respectively,inacellinvasionassayusingMDA-MB-231breastcancercells.(Toppanel)miR-21isanoncogenicmiRNAandmiR-145isatumorsuppressingmiRNA.TransductionofmiRZip-21(theanti-miR21lentiviralconstruct)andmiRZip-145(theanti-miR145lentiviralconstruct),inhibitedtherespectivemiRs,resultinginalowerpercentageofinvADIngcellsinmiRZip-21-transducedcellsandahigherpercentageofinvadingcellsinmiRZip-145-transducedcells.(Bottompanel)Additionally,themiRZip-145lentivirusinhibitedendogenousmiR-145andelevatedproteinexpressionlevelsofthemiR-145targetoncogenec-Myc.

Resources

UserManual:miRZipAntisensemiRNAExpressionPooledLentivirusLibrary
LentivirusSafetyGuidelines
ProductSheet:miRZipAntisensemiRNAExpressionLentivectors

Citations

  • Liu,A,etal.(2017)AntagonizingmiR-455-3pinhibitschemoresistanceandaggressivenessinesophagealsquamouscellcarcinoma.Mol.Cancer.2017Jun21;16(1):106.PMID:28633632
  • Wu,Q,etal.(2017)DownregulationofmicroRNA-448improvesisoflurane-inducedlearningandmemoryimpairmentinrats.MolecularMedicineReports.2017Jun8;:1578-1583.Link:MolecularMedicineReports
  • Sun,J,etal.(2017)Mir-367isdownregulatedincoronaryarterydiseaseanditsoverexpressionexertsanti-inflammatoryeffectviainhibitionoftheNF-κB-activatedinflammatorypathway.InternationalJournalofClinicalandExperimentalPathology.2017Apr15;10(4):4047-4057.Link:InternationalJournalofClinicalandExperimentalPathology
  • Guo,GC,etal.(2017)microRNA-761inducesaggressivephenotypesintriple-negativebreastcancercellsbyrepressingTRIM29expression.CellOncol(Dordr).2017Apr1;40(2):157-166.PMID:28054302
  • Yang,TB,etal.(2017)MutualreinforcementbetweentelomerecappingandcanonicalWntsignallingintheintestinalstemcellniche.NatCommun.2017Mar17;8:14766.PMID:28303901
  • Su,K,etal.(2017)miR-940upregulationcontributestohumancervicalcancerprogressionthroughp27andPTENinhibition..Int.J.Oncol..2017Mar7;.PMID:28350106
  • Moyal,L,etal.(2017)OncogenicroleofmicroRNA-155inmycosisfungoides:aninvitroandxenograftmousemodelstudy.Br.J.Dermatol..2017Mar3;.PMID:28256712
  • Li,G,etal.(2017)ThemicroRNA-182-PDK4axisregulateslungtumOrigenesisbymodulatingpyruvatedehydrogenaseandlipogenesis.Oncogene.2017Feb16;36(7):989-998.PMID:27641336
  • Teteloshvili,N,etal.(2017)Argonaute2immunoprecipitationrevealedlargetumorsuppressorkinase1asanovelproapoptotictargetofmiR-21inTcells.FEBSJ..2017Feb1;284(4):555-567.PMID:28075055
  • Spitschak,A,etal.(2017)MiR-182promotescancerinvasionbylinkingREToncogeneactivatedNF-κBtolossoftheHES1/Notch1regulatorycircuit.Mol.Cancer.2017Jan26;16(1):24.PMID:28122586
  • Beezhold,K,Klei,LR&Barchowsky,A.(2017)RegulationofcyclinD1byarsenicandmicroRNAinhibitsAdipogenesis.Toxicol.Lett..2017Jan4;265:147-155.PMID:27932253
  • Poon,VY,etal.(2016)miR-27bshapesthepresynaptictranscriptomeandinfluencesneurotransmissionbysilencingthepolycombgroupproteinBmi1.BMCGenomics.2016Oct4;17(1):777.PMID:27716060
  • Shen,X,etal.(2016)miR-322/-503clusterisexpressedintheearliestcardiacProgenitorcellsanddrivescardiomyocytespecification.Proc.Natl.Acad.Sci.U.S.A..2016Aug23;113(34):9551-6.PMID:27512039
  • Langsch,S,etal.(2016)miR-29bMediatesNF-κBSignalinginKRAS-InducedNon-SmallCellLungCancers..CancerRes..2016Jul15;76(14):4160-9.PMID:27199349
  • Wang,S,etal.(2016)MicroRNA-mediatedepigenetictargetingofSurvivinsignificantlyenhancestheantitumoractivityofpaclitaxelagainstnon-smallcelllungcancer.Oncotarget.2016Jun21;7(25):37693-37713.PMID:27177222
  • Zheng,D,etal.(2016)InhibitionofMicroRNA195PreventsApoptosisandMultiple-OrganInjuryinMouseModelsofSepsis.J.Infect.Dis..2016May15;213(10):1661-70.PMID:26704614
  • Tan,Z,etal.(2016)MicroRNA-1229overexpressionpromotescellproliferationandtumorigenicityandactivatesWnt/β-cateninsignalinginbreastcancer.Oncotarget.2016Apr26;7(17):24076-87.PMID:26992223
  • Lin,SC,etal.(2016)DysregulationofmiRNAs-COUP-TFII-FOXM1-CENPFaxiscontributestothemetastasisofprostatecancer.NatCommun.2016Apr25;7:11418.PMID:27108958
  • Hong,X,etal.(2016)MiR-448promotesglycolyticmetabolismofgastriccancerbydownregulatingKDM2B.Oncotarget.2016Apr19;7(16):22092-102.PMID:26989077
  • Liang,ML,etal.(2016)DownregulationofmiR-137andmiR-6500-3ppromotescellproliferationinpediatrichigh-gradegliomas.Oncotarget.2016Apr12;7(15):19723-37.PMID:26933822
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